Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A9819_28545 | Not Available | Positive | 5399887 - 5400234 | 13346.7 |
| par-like protein | A9819_28550 | Not Available | Negative | 5400838 - 5401017 | 6551.96 |
| cobyrinic acid ac-diamide synthase | A9819_28555 | Not Available | Negative | 5401137 - 5401763 | 22992.5 |
| translesion error-prone dna polymerase v subunit umuc | A9819_28560 | Not Available | Negative | 5401983 - 5403254 | 47634.6 |
| peptidase | A9819_28565 | Not Available | Negative | 5403254 - 5403691 | 16176.1 |
| protein impc | A9819_28570 | Not Available | Negative | 5403688 - 5403936 | 9502.3 |
| type ii secretion protein f | A9819_28585 | Not Available | Positive | 5404569 - 5405669 | 40999.4 |
| pils domain-containing protein | A9819_28590 | Not Available | Positive | 5405743 - 5406279 | 19338.2 |
| lytic transglycosylase | A9819_28595 | Not Available | Positive | 5406333 - 5406806 | 17781.6 |
| prepilin peptidase | A9819_28600 | Not Available | Positive | 5406825 - 5407460 | 22969.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





