Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbc | A9819_28380 | Not Available | Positive | 5380804 - 5381726 | 35465.7 |
| hypothetical protein | A9819_28390 | Not Available | Positive | 5382278 - 5382553 | 10624.8 |
| plasmid mobilization protein | A9819_28395 | Not Available | Negative | 5382562 - 5382693 | 4940.13 |
| hypothetical protein | A9819_28400 | Not Available | Negative | 5382684 - 5382905 | 8222.9 |
| nuclease | A9819_28405 | Not Available | Negative | 5382933 - 5384531 | 59244.3 |
| plasmid mobilization relaxosome protein mobc | A9819_28410 | Not Available | Negative | 5384521 - 5384868 | 12866.7 |
| rop family plasmid primer rna-binding protein | A9819_28415 | Not Available | Positive | 5384912 - 5385103 | 7198.4 |
| hypothetical protein | A9819_28420 | Not Available | Negative | 5385255 - 5385527 | 10170.8 |
| hypothetical protein | A9819_28425 | Not Available | Positive | 5385603 - 5385863 | 9226.26 |
| lysis protein for colicin e6 | A9819_28435 | Not Available | Negative | 5386150 - 5386296 | 4921.24 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





