Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication protein repa4 | A9819_28320 | Not Available | Positive | 5374823 - 5374954 | 4678.65 |
| replication protein | A9819_28325 | Not Available | Negative | 5374970 - 5375170 | 7616.99 |
| replication initiation protein | A9819_28335 | Not Available | Negative | 5375530 - 5376552 | 40138.3 |
| repa leader peptide tap | A9819_28340 | Not Available | Negative | 5376545 - 5376619 | 2603.26 |
| replication protein repa | A9819_28345 | Not Available | Positive | 5376698 - 5376811 | 4165.98 |
| replication protein repa | A9819_28350 | Not Available | Negative | 5376852 - 5377109 | 9659.68 |
| hok/gef family protein | A9819_28355 | Not Available | Negative | 5377393 - 5377542 | 5543.0 |
| hypothetical protein | A9819_28365 | Not Available | Negative | 5378208 - 5378390 | 6731.03 |
| conjugal transfer protein trba | A9819_28370 | Not Available | Positive | 5378446 - 5379708 | 48180.3 |
| protein-disulfide isomerase | A9819_28375 | Not Available | Positive | 5379705 - 5380823 | 40294.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





