Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid transfer protein | A9819_28255 | Not Available | Positive | 5362611 - 5362961 | 13658.8 |
| pilus assembly protein | A9819_28260 | Not Available | Positive | 5362961 - 5363758 | 29764.9 |
| trhk | A9819_28265 | Not Available | Positive | 5363761 - 5364993 | 44416.4 |
| hypothetical protein | A9819_28270 | Not Available | Positive | 5364995 - 5365435 | 16384.4 |
| conjugal transfer protein trab | A9819_28275 | Not Available | Positive | 5365425 - 5366783 | 48349.6 |
| transcriptional regulator | A9819_28280 | Not Available | Positive | 5366792 - 5367304 | 19023.8 |
| htdt | A9819_28285 | Not Available | Positive | 5367305 - 5368162 | 31689.7 |
| trhv | A9819_28290 | Not Available | Positive | 5368172 - 5369122 | 33795.1 |
| conjugal transfer protein | A9819_28295 | Not Available | Positive | 5369131 - 5371812 | 101936.0 |
| is91 family transposase | A9819_28305 | Not Available | Positive | 5372665 - 5373695 | 40344.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





