Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | A9819_27780 | Not Available | Positive | 5288622 - 5289628 | 37300.8 |
| cysteine protease domain, yopt-type | A9819_27845 | Not Available | Negative | 5296978 - 5304789 | 295162.0 |
| transposase | A9819_27850 | Not Available | Positive | 5304980 - 5305258 | 9775.77 |
| resolvase | A9819_27855 | Not Available | Positive | 5305296 - 5305853 | 21221.6 |
| tn3 family transposase | A9819_27860 | Not Available | Positive | 5305856 - 5308828 | 111065.0 |
| tetracycline repressor protein class c | A9819_27865 | Not Available | Negative | 5308906 - 5309565 | 24175.8 |
| tetracycline efflux mfs transporter tet(c) | A9819_27870 | Not Available | Positive | 5309658 - 5310848 | 41572.9 |
| hypothetical protein | A9819_27875 | Not Available | Positive | 5310752 - 5311090 | 12566.4 |
| hypothetical protein | A9819_27880 | Not Available | Negative | 5311087 - 5311272 | 6811.26 |
| resolvase | A9819_27885 | Not Available | Positive | 5311298 - 5311576 | 10262.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





