Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system protein | A9819_27425 | Not Available | Positive | 5239064 - 5239261 | 7590.89 |
| type ii toxin-antitoxin system rele/pare family toxin | A9819_27430 | Not Available | Positive | 5239258 - 5239440 | 7000.44 |
| catalase-peroxidase 2 | A9819_27440 | Not Available | Positive | 5240365 - 5242575 | 81798.5 |
| cytochrome b562 family protein | A9819_27445 | Not Available | Positive | 5242619 - 5243008 | 14582.7 |
| plasmid stabilization protein | A9819_27455 | Not Available | Negative | 5243969 - 5244364 | 14767.7 |
| plasmid stabilization protein | A9819_27460 | Not Available | Negative | 5244364 - 5245323 | 35626.6 |
| conjugal transfer protein trau | A9819_27465 | Not Available | Positive | 5245559 - 5246359 | 29774.1 |
| hypothetical protein | A9819_27490 | Not Available | Positive | 5249196 - 5249561 | 13701.4 |
| hypothetical protein | A9819_27495 | Not Available | Positive | 5249646 - 5250092 | 17073.6 |
| type-f conjugative transfer system pilin chaperone traq | A9819_27500 | Not Available | Positive | 5250158 - 5250445 | 11262.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





