Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit alpha | A9819_00870 | Not Available | Positive | 186265 - 189747 | 129912.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | A9819_00875 | Not Available | Positive | 189760 - 190719 | 35229.6 |
| lysine decarboxylase ldcc | A9819_00880 | Not Available | Positive | 190818 - 192959 | 80579.9 |
| voc family protein | A9819_00885 | Not Available | Positive | 193016 - 193405 | 14707.4 |
| trna lysidine(34) synthetase tils | A9819_00890 | Not Available | Positive | 193470 - 194765 | 47999.8 |
| protein rof | A9819_00895 | Not Available | Negative | 194818 - 195072 | 9480.16 |
| hypothetical protein | A9819_00900 | Not Available | Negative | 195065 - 195265 | 7214.59 |
| hypothetical protein | A9819_00905 | Not Available | Positive | 195431 - 195976 | 20849.7 |
| peptidyl-trna hydrolase arfb | A9819_00910 | Not Available | Positive | 195973 - 196395 | 15591.9 |
| copper homeostasis/adhesion lipoprotein nlpe | A9819_00915 | Not Available | Positive | 196409 - 197119 | 25855.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





