Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein kinase | A9819_26880 | Not Available | Positive | 5141442 - 5142941 | 56900.0 |
| is1 family transposase | A9819_26895 | Not Available | Negative | 5145106 - 5145185 | 2485.91 |
| hypothetical protein | A9819_26905 | Not Available | Negative | 5146033 - 5147379 | 51229.5 |
| proq/fino family protein | A9819_26915 | Not Available | Positive | 5147733 - 5148335 | 22465.9 |
| transposase | A9819_26920 | Not Available | Positive | 5148527 - 5148607 | 3106.99 |
| incfii family plasmid replication initiator repa | A9819_26925 | Not Available | Negative | 5148608 - 5148715 | 4063.77 |
| hypothetical protein | A9819_26930 | Not Available | Negative | 5148897 - 5149088 | 7218.82 |
| transcription termination factor nusg | A9819_26935 | Not Available | Positive | 5149415 - 5149941 | 20385.6 |
| hypothetical protein | A9819_26945 | Not Available | Positive | 5150514 - 5150846 | 13035.5 |
| dead/deah box helicase | A9819_26950 | Not Available | Positive | 5151001 - 5153361 | 87941.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





