Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | A9819_26670 | Not Available | Positive | 5100141 - 5100674 | 19523.0 |
| duf905 domain-containing protein | A9819_26675 | Not Available | Positive | 5100732 - 5100965 | 9200.75 |
| chromosome partitioning protein parb | A9819_26680 | Not Available | Positive | 5101029 - 5101504 | 16991.6 |
| hypothetical protein | A9819_26685 | Not Available | Positive | 5101505 - 5101820 | 11950.2 |
| hypothetical protein | A9819_26695 | Not Available | Positive | 5102860 - 5103042 | 6778.06 |
| para family protein | A9819_26700 | Not Available | Positive | 5103594 - 5104847 | 47027.0 |
| peptide transporter | A9819_26705 | Not Available | Positive | 5104844 - 5105851 | 38619.1 |
| hypothetical protein | A9819_26710 | Not Available | Negative | 5106034 - 5106426 | 14127.0 |
| lipoprotein | A9819_26715 | Not Available | Negative | 5106423 - 5106944 | 18929.7 |
| hypothetical protein | A9819_26720 | Not Available | Negative | 5106937 - 5107776 | 30846.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





