Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein | A9819_26600 | Not Available | Positive | 5090004 - 5090555 | 20173.6 |
| type vi secretion system baseplate subunit tssk | A9819_26605 | Not Available | Positive | 5090574 - 5091953 | 53450.3 |
| type iv secretion protein dotu | A9819_26615 | Not Available | Positive | 5092291 - 5092799 | 19667.8 |
| chromosome partitioning protein parb | A9819_26630 | Not Available | Positive | 5095940 - 5096629 | 25241.1 |
| conjugation system sos inhibitor psib | A9819_26635 | Not Available | Positive | 5096684 - 5097118 | 15864.0 |
| plasmid sos inhibition protein a | A9819_26640 | Not Available | Positive | 5097115 - 5097834 | 27650.9 |
| hypothetical protein | A9819_26645 | Not Available | Positive | 5097831 - 5098427 | 22310.1 |
| antirestriction protein arda | A9819_26655 | Not Available | Positive | 5098892 - 5099392 | 19175.7 |
| hypothetical protein | A9819_26660 | Not Available | Negative | 5099342 - 5099572 | 7857.1 |
| hypothetical protein | A9819_26665 | Not Available | Positive | 5099938 - 5100144 | 7430.68 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





