Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | A9819_26440 | Not Available | Positive | 5066471 - 5067349 | 33684.1 |
| hypothetical protein | A9819_26445 | Not Available | Positive | 5067411 - 5067617 | 7766.33 |
| xre family transcriptional regulator | A9819_26450 | Not Available | Negative | 5067648 - 5067899 | 9836.78 |
| hypothetical protein | A9819_26455 | Not Available | Negative | 5067933 - 5068130 | 7346.11 |
| hypothetical protein | A9819_26460 | Not Available | Positive | 5068139 - 5068354 | 7701.28 |
| duf4942 domain-containing protein | A9819_26465 | Not Available | Positive | 5068479 - 5069327 | 32151.5 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobc | A9819_26470 | Not Available | Negative | 5069413 - 5069748 | 12432.8 |
| nika protein | A9819_26475 | Not Available | Positive | 5069981 - 5070313 | 12731.3 |
| relaxase nikb | A9819_26480 | Not Available | Positive | 5070325 - 5071258 | 36067.5 |
| hypothetical protein | A9819_26485 | Not Available | Negative | 5071262 - 5071594 | 10784.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





