Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein mcbf | A9819_26270 | Not Available | Negative | 5037752 - 5038483 | 28006.0 |
| protein mcbe | A9819_26275 | Not Available | Negative | 5038480 - 5039205 | 27802.8 |
| microcin b17 processing protein mcbc | A9819_26280 | Not Available | Negative | 5039215 - 5040405 | 44922.6 |
| mcbb family protein | A9819_26290 | Not Available | Negative | 5041205 - 5042092 | 33971.2 |
| autotransporter outer membrane beta-barrel domain-containing protein | A9819_26300 | Not Available | Positive | 5043177 - 5046540 | 119383.0 |
| conjugal transfer protein | A9819_26315 | Not Available | Positive | 5047427 - 5047954 | 20126.5 |
| hypothetical protein | A9819_26320 | Not Available | Positive | 5048108 - 5048311 | 7687.17 |
| autotransporter outer membrane beta-barrel domain-containing protein | A9819_26325 | Not Available | Positive | 5049154 - 5051743 | 93127.0 |
| is3 family transposase | A9819_26330 | Not Available | Negative | 5051786 - 5052999 | 46418.3 |
| pilus assembly protein pilp | A9819_26335 | Not Available | Negative | 5053278 - 5053730 | 16351.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





