Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate racemase | A9819_26160 | Not Available | Negative | 5025092 - 5025811 | 26292.1 |
| lysr family transcriptional regulator | A9819_26165 | Not Available | Positive | 5026156 - 5027100 | 35484.1 |
| hypothetical protein | A9819_26180 | Not Available | Negative | 5027941 - 5028120 | 6799.74 |
| duf3927 domain-containing protein | A9819_26185 | Not Available | Negative | 5028083 - 5028259 | 6487.99 |
| Trna-pseudo | Not Available | Not Available | Positive | 5028447 - 5028517 | Not Available |
| hypothetical protein | A9819_26190 | Not Available | Negative | 5028621 - 5028812 | 7553.4 |
| type vi secretion system tube protein hcp | A9819_26195 | Not Available | Positive | 5028814 - 5028983 | 6645.0 |
| sialate o-acetylesterase | A9819_26200 | Not Available | Negative | 5028984 - 5029681 | 24126.9 |
| ethanolamine utilization protein eutg | A9819_26210 | Not Available | Negative | 5029955 - 5030062 | 4279.27 |
| hypothetical protein | A9819_26215 | Not Available | Positive | 5030181 - 5030390 | 7777.62 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





