Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A9819_26075 | Not Available | Negative | 5017637 - 5017828 | 7314.86 |
| hypothetical protein | A9819_26080 | Not Available | Negative | 5017828 - 5018032 | 7517.13 |
| luxr family transcriptional regulator | A9819_26085 | Not Available | Negative | 5018060 - 5018344 | 10632.9 |
| hypothetical protein | A9819_26090 | Not Available | Negative | 5018419 - 5018732 | 11658.1 |
| transposase | A9819_26095 | Not Available | Negative | 5018733 - 5018813 | 3130.97 |
| small toxic polypeptide | A9819_26110 | Not Available | Negative | 5019926 - 5020078 | 5937.42 |
| peptidase m15 | A9819_26115 | Not Available | Negative | 5020280 - 5020657 | 14423.4 |
| hypothetical protein | A9819_26120 | Not Available | Negative | 5020759 - 5021025 | 10506.0 |
| transposase | A9819_26145 | Not Available | Positive | 5023268 - 5023348 | 3130.97 |
| c4-dicarboxylate abc transporter | A9819_26155 | Not Available | Negative | 5023728 - 5025026 | 45139.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





