Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein | A9819_26005 | Not Available | Negative | 5002617 - 5003366 | 27088.6 |
| lytic transglycosylase | A9819_26010 | Not Available | Positive | 5003514 - 5004029 | 19926.8 |
| Trna-ile | Not Available | Not Available | Positive | 5008424 - 5008500 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 5008543 - 5008618 | Not Available |
| hypothetical protein | A9819_26035 | Not Available | Positive | 5008729 - 5009193 | 16825.2 |
| hemolysin d | A9819_26050 | Not Available | Negative | 5009979 - 5011415 | 54510.1 |
| type i secretion system permease/atpase | A9819_26055 | Not Available | Negative | 5011434 - 5013557 | 79637.6 |
| rtx toxin hemolysin a | A9819_26060 | Not Available | Negative | 5013630 - 5016710 | 110332.0 |
| toxin-activating lysine-acyltransferase | A9819_26065 | Not Available | Negative | 5016722 - 5017234 | 19742.6 |
| hypothetical protein | A9819_26070 | Not Available | Negative | 5017337 - 5017562 | 7955.78 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





