Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A9819_25905 | Not Available | Positive | 4986670 - 4986993 | 11994.7 |
| hypothetical protein | A9819_25910 | Not Available | Positive | 4987307 - 4987618 | 11635.3 |
| hypothetical protein | A9819_25915 | Not Available | Negative | 4987515 - 4987787 | 9947.0 |
| is1 family transposase | A9819_25920 | Not Available | Positive | 4987828 - 4987951 | 4751.77 |
| duf4263 domain-containing protein | A9819_25925 | Not Available | Negative | 4987984 - 4988790 | 31902.5 |
| isncy family transposase | A9819_25930 | Not Available | Negative | 4989053 - 4990450 | 53504.3 |
| hypothetical protein | A9819_25935 | Not Available | Positive | 4990996 - 4991355 | 13978.0 |
| hypothetical protein | A9819_25940 | Not Available | Positive | 4991438 - 4991911 | 18374.6 |
| hypothetical protein | A9819_25945 | Not Available | Positive | 4991945 - 4992370 | 15096.6 |
| hypothetical protein | A9819_25950 | Not Available | Negative | 4992382 - 4992768 | 14422.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





