Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A9819_25640 | Not Available | Positive | 4942376 - 4942785 | 14344.7 |
| type iv secretion protein dotu | A9819_25645 | Not Available | Positive | 4943038 - 4943144 | 4174.34 |
| type vi secretion protein | A9819_25650 | Not Available | Positive | 4943151 - 4946555 | 130226.0 |
| type vi secretion system atpase tssh | A9819_25655 | Not Available | Positive | 4946559 - 4949087 | 94081.1 |
| hypothetical protein | A9819_25660 | Not Available | Positive | 4949789 - 4950934 | 43990.4 |
| kinesin | A9819_25665 | Not Available | Positive | 4951121 - 4951621 | 19073.2 |
| hypothetical protein | A9819_25670 | Not Available | Positive | 4951660 - 4952223 | 21579.7 |
| hypothetical protein | A9819_25685 | Not Available | Positive | 4953698 - 4953886 | 7470.04 |
| is3 family transposase | A9819_25700 | Not Available | Negative | 4954291 - 4955459 | 45184.2 |
| is66 family insertion sequence hypothetical protein | A9819_25715 | Not Available | Negative | 4957045 - 4957395 | 13132.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





