Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hok/gef family protein | A9819_25415 | Not Available | Positive | 4909644 - 4909796 | 5734.3 |
| antitoxin | A9819_25420 | Not Available | Negative | 4909793 - 4909954 | 6011.5 |
| glutamate decarboxylase isozyme | A9819_25425 | Not Available | Positive | 4909964 - 4910052 | 3089.86 |
| hypothetical protein | A9819_25430 | Not Available | Negative | 4910199 - 4910744 | 20978.7 |
| hypothetical protein | A9819_25435 | Not Available | Positive | 4910969 - 4911215 | 9496.27 |
| incfii family plasmid replication initiator repa | A9819_25440 | Not Available | Negative | 4911216 - 4911323 | 4063.77 |
| hypothetical protein | A9819_25445 | Not Available | Negative | 4911508 - 4911699 | 7266.94 |
| transcription termination factor nusg | A9819_25450 | Not Available | Positive | 4912026 - 4912552 | 20396.7 |
| phage tail protein | A9819_25455 | Not Available | Negative | 4912621 - 4913268 | 22983.9 |
| phage tail protein | A9819_25460 | Not Available | Negative | 4913166 - 4913909 | 28302.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





