Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase crec | A9819_25025 | Not Available | Positive | 4856945 - 4858369 | 52259.5 |
| cell envelope integrity protein cred | A9819_25030 | Not Available | Positive | 4858427 - 4859779 | 49895.8 |
| dna-binding response regulator | A9819_25035 | Not Available | Negative | 4859839 - 4860555 | 27293.6 |
| hypothetical protein | A9819_25040 | Not Available | Positive | 4860651 - 4860791 | 4886.09 |
| rna methyltransferase | A9819_25045 | Not Available | Positive | 4861191 - 4861877 | 25304.6 |
| thr operon leader peptide | A9819_25050 | Not Available | Positive | 4862091 - 4862168 | 2555.11 |
| bifunctional aspartokinase i/homoserine dehydrogenase i | A9819_25055 | Not Available | Positive | 4862249 - 4864711 | 89125.5 |
| homoserine kinase | A9819_25060 | Not Available | Positive | 4864713 - 4865645 | 33611.6 |
| threonine synthase | A9819_25065 | Not Available | Positive | 4865646 - 4866932 | 47086.4 |
| duf2502 domain-containing protein | A9819_25070 | Not Available | Positive | 4867146 - 4867442 | 11409.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





