Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine radical enzyme, yjji family | A9819_24925 | Not Available | Negative | 4835764 - 4837314 | 58023.3 |
| 2-deoxyribose-5-phosphate aldolase | A9819_24930 | Not Available | Positive | 4837572 - 4838351 | 27735.3 |
| thymidine phosphorylase | A9819_24935 | Not Available | Positive | 4838478 - 4839800 | 47209.9 |
| phosphopentomutase | A9819_24940 | Not Available | Positive | 4839852 - 4841075 | 44372.4 |
| purine-nucleoside phosphorylase | A9819_24945 | Not Available | Positive | 4841132 - 4841851 | 25951.4 |
| transcriptional regulator | A9819_24950 | Not Available | Positive | 4842018 - 4843349 | 49759.4 |
| lipoate--protein ligase a | A9819_24955 | Not Available | Negative | 4843350 - 4844366 | 37927.9 |
| protein smp | A9819_24960 | Not Available | Negative | 4844394 - 4845038 | 24084.2 |
| phosphoserine phosphatase | A9819_24965 | Not Available | Positive | 4845144 - 4846112 | 35044.8 |
| dna repair protein rada | A9819_24970 | Not Available | Positive | 4846161 - 4847543 | 49475.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





