Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase | A9819_24775 | Not Available | Negative | 4808309 - 4809775 | 53034.7 |
| 4-hydroxyphenylacetate degradation protein | A9819_24780 | Not Available | Negative | 4809772 - 4811067 | 47341.4 |
| homoprotocatechuate degradation operon regulator hpar | A9819_24785 | Not Available | Positive | 4811279 - 4811779 | 19496.6 |
| methyl-accepting chemotaxis protein ii | A9819_24790 | Not Available | Positive | 4811897 - 4813561 | 59813.9 |
| mfs transporter | A9819_24795 | Not Available | Negative | 4813610 - 4814971 | 49437.5 |
| gntr family transcriptional regulator | A9819_24800 | Not Available | Negative | 4815186 - 4816100 | 35390.2 |
| galactonate oxidoreductase | A9819_24805 | Not Available | Positive | 4816239 - 4817261 | 36452.0 |
| phosphoglycerol transferase i | A9819_24810 | Not Available | Negative | 4817399 - 4819690 | 85498.6 |
| hypothetical protein | A9819_24815 | Not Available | Negative | 4819944 - 4820438 | 17353.6 |
| dna replication protein dnac | A9819_24820 | Not Available | Negative | 4820487 - 4821224 | 27936.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





