Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-adapter protein irad | A9819_24560 | Not Available | Positive | 4762980 - 4763372 | 14773.8 |
| transcriptional regulator | A9819_24565 | Not Available | Negative | 4763365 - 4764276 | 34698.6 |
| beta-aspartyl-peptidase | A9819_24570 | Not Available | Negative | 4764341 - 4765513 | 41088.3 |
| hypothetical protein | A9819_24575 | Not Available | Negative | 4765526 - 4765987 | 16194.5 |
| hypothetical protein | A9819_24580 | Not Available | Negative | 4765984 - 4766667 | 23794.8 |
| hypothetical protein | A9819_24585 | Not Available | Positive | 4766697 - 4766888 | 7331.32 |
| rna 2'-phosphotransferase | A9819_24590 | Not Available | Positive | 4766917 - 4767468 | 20304.4 |
| hypothetical protein | A9819_24595 | Not Available | Negative | 4767625 - 4772661 | 180921.0 |
| mfs transporter | A9819_24605 | Not Available | Negative | 4773076 - 4774254 | 41308.0 |
| hypothetical protein | A9819_24610 | Not Available | Negative | 4774322 - 4775182 | 32170.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





