Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate carbamoyltransferase catalytic subunit | A9819_24290 | Not Available | Negative | 4713142 - 4714077 | 34429.3 |
| pyrbi operon leader peptide | A9819_24295 | Not Available | Negative | 4714081 - 4714215 | 5098.43 |
| hypothetical protein | A9819_24300 | Not Available | Positive | 4714345 - 4714527 | 6855.32 |
| rida family protein | A9819_24305 | Not Available | Negative | 4714496 - 4714891 | 14595.2 |
| oxidoreductase | A9819_24310 | Not Available | Negative | 4715022 - 4715735 | 24601.5 |
| tetr/acrr family transcriptional regulator | A9819_24315 | Not Available | Positive | 4715806 - 4716399 | 21369.5 |
| yhch/yjgk/yial family protein | A9819_24320 | Not Available | Positive | 4716544 - 4716996 | 16896.3 |
| ornithine carbamoyltransferase | A9819_24330 | Not Available | Negative | 4718961 - 4719965 | 36892.2 |
| regulator of ribonuclease activity b | A9819_24335 | Not Available | Positive | 4720127 - 4720543 | 15603.5 |
| gnat family n-acetyltransferase | A9819_24340 | Not Available | Negative | 4720589 - 4721092 | 18575.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





