Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A9819_24135 | Not Available | Positive | 4679238 - 4679936 | 26663.7 |
| ytfj family protein | A9819_24140 | Not Available | Negative | 4679999 - 4680553 | 20495.7 |
| hypothetical protein | A9819_24145 | Not Available | Positive | 4680878 - 4681084 | 8072.24 |
| transporter | A9819_24150 | Not Available | Negative | 4681146 - 4682489 | 49783.6 |
| peptide-methionine (s)-s-oxide reductase | A9819_24155 | Not Available | Negative | 4682812 - 4683450 | 23316.3 |
| hypothetical protein | A9819_24160 | Not Available | Positive | 4683507 - 4683686 | 6739.28 |
| hypothetical protein | A9819_24165 | Not Available | Positive | 4683656 - 4685389 | 64776.6 |
| translocation and assembly module tamb | A9819_24170 | Not Available | Positive | 4685386 - 4689165 | 136745.0 |
| gamma-glutamylcyclotransferase ytfp | A9819_24175 | Not Available | Positive | 4689168 - 4689509 | 12867.2 |
| antitoxin chps | A9819_24180 | Not Available | Positive | 4689721 - 4689972 | 9302.15 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





