Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | A9819_24080 | Not Available | Positive | 4667404 - 4668024 | 22249.6 |
| d-serine/d-alanine/glycine transporter | A9819_24085 | Not Available | Positive | 4668333 - 4669736 | 51324.2 |
| hypothetical protein | A9819_24090 | Not Available | Positive | 4669871 - 4671034 | 44177.1 |
| hypothetical protein | A9819_24095 | Not Available | Positive | 4671068 - 4672561 | 56839.0 |
| iron-sulfur cluster repair di-iron protein | A9819_24100 | Not Available | Negative | 4672613 - 4673275 | 24852.0 |
| eama/rhat family transporter | A9819_24105 | Not Available | Negative | 4673383 - 4674348 | 35267.6 |
| nad(p)-dependent oxidoreductase | A9819_24110 | Not Available | Negative | 4674456 - 4675328 | 30230.8 |
| transcriptional regulator | A9819_24115 | Not Available | Positive | 4675417 - 4675797 | 14094.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase | A9819_24120 | Not Available | Negative | 4675915 - 4677858 | 70835.0 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | A9819_24125 | Not Available | Positive | 4678048 - 4678788 | 27138.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





