Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 | A9819_24020 | Not Available | Positive | 4661584 - 4661979 | 15187.9 |
| primosomal replication protein n | A9819_24025 | Not Available | Positive | 4661986 - 4662300 | 11472.9 |
| 30s ribosomal protein s18 | A9819_24030 | Not Available | Positive | 4662305 - 4662532 | 8986.94 |
| 50s ribosomal protein l9 | A9819_24035 | Not Available | Positive | 4662574 - 4663023 | 15770.0 |
| hypothetical protein | A9819_24040 | Not Available | Negative | 4663094 - 4663888 | 29699.0 |
| is200/is605 family transposase | A9819_24055 | Not Available | Negative | 4664512 - 4664784 | 9993.9 |
| is200/is605 family transposase | A9819_24060 | Not Available | Negative | 4664785 - 4665070 | 11084.5 |
| transposase | A9819_24065 | Not Available | Positive | 4665078 - 4666286 | 45866.2 |
| hypothetical protein | A9819_24070 | Not Available | Negative | 4666548 - 4667186 | 23506.9 |
| hypothetical protein | A9819_24075 | Not Available | Negative | 4667226 - 4667411 | 6775.18 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





