Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | A9819_23915 | Not Available | Positive | 4645741 - 4646472 | 26558.3 |
| duf2170 domain-containing protein | A9819_23920 | Not Available | Positive | 4646599 - 4647000 | 14934.9 |
| hypothetical protein | A9819_23925 | Not Available | Positive | 4647019 - 4647717 | 25335.0 |
| hypothetical protein | A9819_23930 | Not Available | Positive | 4647768 - 4648427 | 25040.4 |
| duf350 domain-containing protein | A9819_23935 | Not Available | Positive | 4648445 - 4648843 | 14238.7 |
| duf1190 domain-containing protein | A9819_23940 | Not Available | Positive | 4648853 - 4649491 | 23564.2 |
| hypothetical protein | A9819_23945 | Not Available | Positive | 4649494 - 4650657 | 45036.0 |
| isovaleryl-coa dehydrogenase | A9819_23950 | Not Available | Positive | 4650741 - 4652366 | 60594.5 |
| hypothetical protein | A9819_23960 | Not Available | Negative | 4652483 - 4652758 | 9949.64 |
| lipoprotein bsma | A9819_23965 | Not Available | Negative | 4652907 - 4653236 | 12066.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





