Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A9819_23765 | Not Available | Negative | 4614088 - 4614621 | 19924.7 |
| class c beta-lactamase | A9819_23770 | Not Available | Negative | 4614710 - 4615843 | 41523.9 |
| fumarate reductase subunit d | A9819_23775 | Not Available | Negative | 4615906 - 4616265 | 13107.8 |
| fumarate reductase subunit c | A9819_23780 | Not Available | Negative | 4616276 - 4616671 | 15015.8 |
| fumarate reductase iron-sulfur subunit | A9819_23785 | Not Available | Negative | 4616682 - 4617416 | 27124.5 |
| fumarate reductase (quinol) flavoprotein subunit | A9819_23790 | Not Available | Negative | 4617409 - 4619217 | 65975.5 |
| elongation factor p--(r)-beta-lysine ligase | A9819_23795 | Not Available | Positive | 4619542 - 4620519 | 36978.1 |
| glutamate/gamma-aminobutyrate family transporter yjem | A9819_23800 | Not Available | Positive | 4620738 - 4622240 | 54693.2 |
| miniconductance mechanosensitive channel mscm | A9819_23805 | Not Available | Negative | 4622391 - 4625714 | 123961.0 |
| phosphatidylserine decarboxylase proenzyme | A9819_23810 | Not Available | Negative | 4625736 - 4626704 | 35936.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





