Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein fimd | A9819_23610 | Not Available | Negative | 4581298 - 4583835 | 93931.4 |
| molecular chaperone | A9819_23615 | Not Available | Negative | 4583868 - 4584424 | 21051.1 |
| n-acetyltransferase | A9819_23625 | Not Available | Positive | 4588988 - 4589260 | 10469.6 |
| hypothetical protein | A9819_23630 | Not Available | Positive | 4589347 - 4589562 | 8242.34 |
| hypothetical protein | A9819_23635 | Not Available | Positive | 4589487 - 4589783 | 11468.6 |
| duf2566 domain-containing protein | A9819_23640 | Not Available | Positive | 4589811 - 4589984 | 6555.44 |
| lysine--trna ligase heat inducible | A9819_23645 | Not Available | Negative | 4590103 - 4591620 | 57829.9 |
| mfs transporter | A9819_23650 | Not Available | Negative | 4591857 - 4593314 | 52990.6 |
| lysine decarboxylase ldcc | A9819_23655 | Not Available | Negative | 4593373 - 4595520 | 81296.8 |
| cadaverine/lysine antiporter | A9819_23660 | Not Available | Negative | 4595600 - 4596934 | 46649.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





