Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-phosphorus lyase complex subunit phnj | A9819_23445 | Not Available | Negative | 4547992 - 4548837 | 31849.9 |
| carbon-phosphorus lyase complex subunit phni | A9819_23450 | Not Available | Negative | 4548830 - 4549798 | 35328.8 |
| phosphonate c-p lyase system protein phnh | A9819_23455 | Not Available | Negative | 4549798 - 4550382 | 20971.5 |
| phosphonate c-p lyase system protein phng | A9819_23460 | Not Available | Negative | 4550379 - 4550831 | 16555.7 |
| phosphonate metabolism transcriptional regulator phnf | A9819_23465 | Not Available | Negative | 4550832 - 4551557 | 27637.1 |
| phosphonate abc transporter, permease protein phne | A9819_23470 | Not Available | Negative | 4551578 - 4552357 | 28471.4 |
| phosphonate abc transporter substrate-binding protein | A9819_23475 | Not Available | Negative | 4552463 - 4553479 | 37396.6 |
| phosphonate abc transporter atp-binding protein | A9819_23480 | Not Available | Negative | 4553504 - 4554292 | 29595.7 |
| voc family protein | A9819_23485 | Not Available | Negative | 4554425 - 4554868 | 16156.2 |
| protein phna | A9819_23490 | Not Available | Negative | 4555226 - 4555561 | 12345.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





