Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen decarboxylase | A9819_22830 | Not Available | Positive | 4423800 - 4424864 | 39250.4 |
| endonuclease v | A9819_22835 | Not Available | Positive | 4424874 - 4425545 | 24673.9 |
| duf416 domain-containing protein | A9819_22840 | Not Available | Positive | 4425588 - 4426178 | 22641.9 |
| dna-binding protein hu-alpha | A9819_22845 | Not Available | Positive | 4426365 - 4426637 | 9535.51 |
| hypothetical protein | A9819_22850 | Not Available | Positive | 4426650 - 4427345 | 26382.9 |
| zinc resistance-associated protein | A9819_22855 | Not Available | Negative | 4427347 - 4427766 | 15042.1 |
| zinc resistance-associated protein | A9819_22860 | Not Available | Negative | 4427763 - 4427897 | 5254.15 |
| two-component system sensor histidine kinase zras | A9819_22865 | Not Available | Positive | 4428004 - 4429380 | 50492.0 |
| two-component system response regulator zrar | A9819_22870 | Not Available | Positive | 4429377 - 4430702 | 48337.4 |
| phosphoribosylamine--glycine ligase | A9819_22875 | Not Available | Negative | 4430699 - 4431988 | 45917.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





