Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic protein cpxp | A9819_22360 | Not Available | Positive | 4325537 - 4326037 | 18966.4 |
| cation-efflux pump fief | A9819_22365 | Not Available | Positive | 4326186 - 4327088 | 32929.2 |
| atp-dependent 6-phosphofructokinase | A9819_22370 | Not Available | Positive | 4327269 - 4328231 | 34844.2 |
| sulfate-binding protein | A9819_22375 | Not Available | Positive | 4328551 - 4329540 | 36661.2 |
| cdp-diacylglycerol pyrophosphatase | A9819_22380 | Not Available | Positive | 4329647 - 4330402 | 28384.2 |
| triose-phosphate isomerase | A9819_22385 | Not Available | Negative | 4330457 - 4331224 | 26973.3 |
| triosephosphate isomerase | A9819_22390 | Not Available | Negative | 4331240 - 4331335 | 3435.28 |
| duf1454 domain-containing protein | A9819_22395 | Not Available | Negative | 4331332 - 4331931 | 21752.2 |
| duf805 domain-containing protein | A9819_22400 | Not Available | Positive | 4332032 - 4332472 | 16542.6 |
| hypothetical protein | A9819_22405 | Not Available | Positive | 4332684 - 4332983 | 10746.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





