Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-aminoacyl-trna deacylase | A9819_22200 | Not Available | Positive | 4293442 - 4293879 | 15951.0 |
| acetyltransferase | A9819_22205 | Not Available | Positive | 4293876 - 4294865 | 37096.5 |
| hypothetical protein | A9819_22210 | Not Available | Positive | 4295279 - 4297093 | 67513.4 |
| hypothetical protein | A9819_22215 | Not Available | Positive | 4297143 - 4297244 | 3672.48 |
| hypothetical protein | A9819_22225 | Not Available | Positive | 4297792 - 4298004 | 8164.84 |
| formate dehydrogenase accessory protein fdhe | A9819_22235 | Not Available | Negative | 4298793 - 4299722 | 34690.5 |
| formate dehydrogenase cytochrome b556 subunit | A9819_22240 | Not Available | Negative | 4299719 - 4300354 | 24591.7 |
| formate dehydrogenase-o iron-sulfur subunit | A9819_22245 | Not Available | Negative | 4300351 - 4301253 | 33102.1 |
| formate dehydrogenase o subunit alpha, selenocysteine-containing | A9819_22250 | Not Available | Negative | 4301266 - 4304316 | 112446.0 |
| hypothetical protein | A9819_22255 | Not Available | Positive | 4304320 - 4304574 | 9637.87 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





