Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxygen-independent coproporphyrinogen iii oxidase | A9819_22100 | Not Available | Positive | 4271854 - 4273227 | 52748.0 |
| hypothetical protein | A9819_22105 | Not Available | Negative | 4273417 - 4273527 | 3618.45 |
| nitrogen regulation protein nr(i) | A9819_22110 | Not Available | Negative | 4273639 - 4275048 | 52257.9 |
| two-component system sensor histidine kinase ntrb | A9819_22115 | Not Available | Negative | 4275060 - 4276109 | 38558.5 |
| glutamine synthetase | A9819_22120 | Not Available | Negative | 4276283 - 4277692 | 51906.6 |
| transporter | A9819_22125 | Not Available | Negative | 4277826 - 4277972 | 5550.92 |
| translational gtpase typa | A9819_22130 | Not Available | Positive | 4278065 - 4279888 | 67359.5 |
| gntr family transcriptional regulator | A9819_22135 | Not Available | Positive | 4280105 - 4280815 | 26913.2 |
| hypothetical protein | A9819_22140 | Not Available | Positive | 4280823 - 4281803 | 36974.9 |
| mfs transporter | A9819_22145 | Not Available | Positive | 4281905 - 4283170 | 46382.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





