Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | A9819_21690 | Not Available | Positive | 4192847 - 4193977 | 42220.0 |
| udp-n-acetyl-d-mannosamine dehydrogenase | A9819_21695 | Not Available | Positive | 4193974 - 4195236 | 45855.3 |
| dtdp-glucose 4,6-dehydratase | A9819_21700 | Not Available | Positive | 4195236 - 4196303 | 39755.9 |
| glucose-1-phosphate thymidylyltransferase | A9819_21705 | Not Available | Positive | 4196322 - 4197203 | 32755.3 |
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | A9819_21710 | Not Available | Positive | 4197181 - 4197855 | 24177.6 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | A9819_21715 | Not Available | Positive | 4197860 - 4198990 | 41922.4 |
| lipid iii flippase wzxe | A9819_21720 | Not Available | Positive | 4198992 - 4200242 | 44961.4 |
| 4-alpha-l-fucosyltransferase | A9819_21725 | Not Available | Positive | 4200239 - 4201318 | 40560.7 |
| o-antigen assembly polymerase | A9819_21730 | Not Available | Positive | 4201315 - 4202667 | 51524.2 |
| lipopolysaccharide n-acetylmannosaminouronosyltransferase | A9819_21735 | Not Available | Positive | 4202670 - 4203410 | 28063.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





