Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna small subunit methyltransferase g | A9819_21475 | Not Available | Negative | 4150720 - 4151343 | 23432.5 |
| trna uridine(34) 5-carboxymethylaminomethyl synthesis enzyme mnmg | A9819_21480 | Not Available | Negative | 4151407 - 4153296 | 69525.4 |
| fmn-binding protein mioc | A9819_21485 | Not Available | Negative | 4153675 - 4154118 | 15812.5 |
| asnc family transcriptional regulator | A9819_21490 | Not Available | Negative | 4154208 - 4154666 | 16888.7 |
| aspartate--ammonia ligase | A9819_21495 | Not Available | Positive | 4154818 - 4155810 | 36679.7 |
| protein viaa | A9819_21500 | Not Available | Negative | 4155815 - 4157266 | 55910.6 |
| atpase rava | A9819_21505 | Not Available | Negative | 4157260 - 4158756 | 56447.1 |
| low affinity potassium transport system protein kup | A9819_21510 | Not Available | Positive | 4158979 - 4160847 | 69298.3 |
| d-ribose pyranase | A9819_21515 | Not Available | Positive | 4161014 - 4161433 | 15318.4 |
| ribose import atp-binding protein rbsa | A9819_21520 | Not Available | Positive | 4161441 - 4162946 | 55045.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





