Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A9819_21315 | Not Available | Positive | 4118864 - 4119613 | 27648.2 |
| chromate reductase | A9819_21320 | Not Available | Positive | 4119635 - 4120201 | 20362.8 |
| ncs2 family permease | A9819_21325 | Not Available | Negative | 4120255 - 4121592 | 46829.7 |
| 6-phosphogluconate phosphatase | A9819_21330 | Not Available | Positive | 4121759 - 4122424 | 24811.9 |
| hypothetical protein | A9819_21340 | Not Available | Positive | 4125269 - 4125915 | 25271.0 |
| hypothetical protein | A9819_21350 | Not Available | Negative | 4126157 - 4126297 | 5249.72 |
| type iii effector protein | A9819_21355 | Not Available | Negative | 4126491 - 4127220 | 28972.3 |
| type iii effector protein | A9819_21360 | Not Available | Negative | 4127221 - 4128859 | 63198.4 |
| hypothetical protein | A9819_21365 | Not Available | Negative | 4128942 - 4129148 | 8033.07 |
| hypothetical protein | A9819_21370 | Not Available | Negative | 4129289 - 4129429 | 5500.68 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





