Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit omega | A9819_20845 | Not Available | Positive | 4013111 - 4013386 | 10237.2 |
| bifunctional (p)ppgpp synthetase ii/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | A9819_20850 | Not Available | Positive | 4013405 - 4015513 | 79347.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | A9819_20855 | Not Available | Positive | 4015520 - 4016209 | 25375.6 |
| atp-dependent dna helicase recg | A9819_20860 | Not Available | Positive | 4016215 - 4018296 | 76593.3 |
| sodium/glutamate symport carrier protein | A9819_20865 | Not Available | Negative | 4018472 - 4019677 | 42445.9 |
| xanthine permease xanp | A9819_20870 | Not Available | Positive | 4019956 - 4021347 | 48871.2 |
| asma family protein | A9819_20875 | Not Available | Positive | 4021468 - 4023177 | 62169.7 |
| d-lyxose/d-mannose family sugar isomerase | A9819_20880 | Not Available | Negative | 4023221 - 4023901 | 26154.1 |
| transcriptional regulator | A9819_20885 | Not Available | Negative | 4023882 - 4024814 | 32958.6 |
| ketose-bisphosphate aldolase | A9819_20890 | Not Available | Negative | 4024862 - 4025722 | 30814.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





