Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dutp diphosphatase | A9819_20780 | Not Available | Positive | 4003756 - 4004211 | 16157.4 |
| nucleoid occlusion factor slma | A9819_20785 | Not Available | Positive | 4004318 - 4004914 | 22837.7 |
| orotate phosphoribosyltransferase | A9819_20790 | Not Available | Negative | 4004951 - 4005592 | 23568.3 |
| ribonuclease ph | A9819_20795 | Not Available | Negative | 4005658 - 4006374 | 25327.4 |
| hypothetical protein | A9819_20800 | Not Available | Positive | 4006306 - 4006488 | 6633.33 |
| yicc family protein | A9819_20805 | Not Available | Positive | 4006501 - 4007364 | 33174.9 |
| transposase | A9819_20820 | Not Available | Positive | 4008086 - 4009291 | 44481.1 |
| hypothetical protein | A9819_20830 | Not Available | Positive | 4009879 - 4010496 | 22049.8 |
| nad-dependent dna ligase ligb | A9819_20835 | Not Available | Negative | 4010493 - 4012175 | 63245.9 |
| guanylate kinase | A9819_20840 | Not Available | Positive | 4012433 - 4013056 | 23594.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





