Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter atp-binding protein | A9819_20460 | Not Available | Positive | 3935009 - 3936550 | 56443.9 |
| xylose abc transporter permease | A9819_20465 | Not Available | Positive | 3936528 - 3937709 | 41063.5 |
| xylr family transcriptional regulator | A9819_20470 | Not Available | Positive | 3937787 - 3938965 | 44871.7 |
| protein bax | A9819_20475 | Not Available | Negative | 3939073 - 3939897 | 30869.3 |
| alpha-amylase | A9819_20480 | Not Available | Positive | 3940217 - 3942247 | 75635.4 |
| valine--pyruvate transaminase | A9819_20485 | Not Available | Positive | 3942425 - 3943678 | 46685.9 |
| electron transporter | A9819_20490 | Not Available | Negative | 3943717 - 3944190 | 17363.1 |
| arac family transcriptional regulator | A9819_20500 | Not Available | Negative | 3944434 - 3945249 | 31535.1 |
| mfs transporter | A9819_20505 | Not Available | Positive | 3945475 - 3946875 | 51458.0 |
| hypothetical protein | A9819_20510 | Not Available | Positive | 3946886 - 3948856 | 75102.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





