Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein hoka | A9819_20410 | Not Available | Negative | 3924755 - 3924892 | 5199.54 |
| glycine--trna ligase subunit beta | A9819_20415 | Not Available | Negative | 3925136 - 3927205 | 76831.2 |
| glycine--trna ligase subunit alpha | A9819_20420 | Not Available | Negative | 3927215 - 3928126 | 34718.2 |
| hypothetical protein | A9819_20425 | Not Available | Negative | 3928221 - 3928520 | 11338.8 |
| o-acetyltransferase | A9819_20430 | Not Available | Positive | 3928695 - 3929690 | 37574.0 |
| hypothetical protein | A9819_20435 | Not Available | Negative | 3929732 - 3930169 | 16123.6 |
| hypothetical protein | A9819_20440 | Not Available | Negative | 3930215 - 3930556 | 12553.0 |
| xylulokinase | A9819_20445 | Not Available | Negative | 3930725 - 3932179 | 52468.1 |
| xylose isomerase | A9819_20450 | Not Available | Negative | 3932251 - 3933573 | 49721.7 |
| d-xylose-binding periplasmic protein | A9819_20455 | Not Available | Positive | 3933939 - 3934931 | 35722.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





