Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter atp-binding protein thiq | A9819_00235 | Not Available | Negative | 52160 - 52858 | 24982.6 |
| thiamine/thiamine pyrophosphate abc transporter permease thip | A9819_00240 | Not Available | Negative | 52842 - 54452 | 59393.6 |
| thiamine-binding periplasmic protein | A9819_00245 | Not Available | Negative | 54428 - 55411 | 36165.2 |
| type iii effector | A9819_00250 | Not Available | Positive | 55783 - 56352 | 21625.5 |
| transcriptional regulator sgrr | A9819_00255 | Not Available | Negative | 56582 - 58240 | 64121.9 |
| glucose uptake inhibitor sgrt | A9819_00260 | Not Available | Positive | 58329 - 58460 | 5382.47 |
| 3-isopropylmalate dehydratase small subunit | A9819_00265 | Not Available | Negative | 58568 - 59173 | 22530.8 |
| 3-isopropylmalate dehydratase large subunit | A9819_00270 | Not Available | Negative | 59184 - 60584 | 49884.7 |
| 3-isopropylmalate dehydrogenase | A9819_00275 | Not Available | Negative | 60587 - 61678 | 39503.2 |
| 2-isopropylmalate synthase | A9819_00280 | Not Available | Negative | 61678 - 63249 | 57287.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





