Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptidase a | A9819_19980 | Not Available | Negative | 3835063 - 3837105 | 77231.3 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | A9819_19985 | Not Available | Positive | 3837308 - 3838150 | 31962.5 |
| glutathione-disulfide reductase | A9819_19990 | Not Available | Positive | 3838222 - 3839574 | 48771.3 |
| damage inducible protein | A9819_19995 | Not Available | Negative | 3839628 - 3839711 | 3021.06 |
| hypothetical protein | A9819_20000 | Not Available | Positive | 3839733 - 3839912 | 6497.46 |
| is481 family transposase | A9819_20005 | Not Available | Positive | 3840008 - 3841090 | 42015.9 |
| arsenate reductase (glutaredoxin) | A9819_20010 | Not Available | Positive | 3841346 - 3841771 | 15884.3 |
| hypothetical protein | A9819_20015 | Not Available | Positive | 3841987 - 3842166 | 7192.5 |
| outer membrane protein slp | A9819_20025 | Not Available | Positive | 3843868 - 3844434 | 20949.1 |
| dctr protein | A9819_20030 | Not Available | Positive | 3844475 - 3844651 | 6646.28 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





