Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna processing protein dpra | A9819_19520 | Not Available | Negative | 3748705 - 3749907 | 43883.8 |
| recombinase recq | A9819_19525 | Not Available | Negative | 3749907 - 3752003 | 77512.4 |
| low-affinity gluconate transporter | A9819_19530 | Not Available | Negative | 3752143 - 3753483 | 46418.9 |
| gluconokinase | A9819_19535 | Not Available | Negative | 3753487 - 3754014 | 19544.4 |
| transcriptional regulator | A9819_19540 | Not Available | Negative | 3754153 - 3755148 | 36424.2 |
| quercetin 2,3-dioxygenase | A9819_19545 | Not Available | Negative | 3755372 - 3756067 | 26280.8 |
| oxidoreductase | A9819_19550 | Not Available | Negative | 3756190 - 3757227 | 38744.0 |
| n-acetyltransferase | A9819_19560 | Not Available | Positive | 3757560 - 3758048 | 18838.7 |
| type vi secretion system tube protein hcp | A9819_19565 | Not Available | Positive | 3758285 - 3759463 | 44449.3 |
| hypothetical protein | A9819_19570 | Not Available | Positive | 3759460 - 3759954 | 18990.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





