Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A9819_19470 | Not Available | Negative | 3733875 - 3734474 | 23522.7 |
| abc transporter atp-binding protein | A9819_19475 | Not Available | Negative | 3734477 - 3735469 | 37108.9 |
| phosphate abc transporter substrate-binding protein | A9819_19480 | Not Available | Negative | 3735495 - 3737012 | 57030.4 |
| glycogen phosphorylase | A9819_19485 | Not Available | Negative | 3737130 - 3739577 | 93177.7 |
| glycogen synthase | A9819_19490 | Not Available | Negative | 3739596 - 3741029 | 52825.4 |
| glucose-1-phosphate adenylyltransferase | A9819_19495 | Not Available | Negative | 3741029 - 3742324 | 48700.4 |
| glycogen debranching enzyme | A9819_19500 | Not Available | Negative | 3742342 - 3744315 | 73616.6 |
| glycogen-branching enzyme | A9819_19505 | Not Available | Negative | 3744312 - 3746498 | 84373.5 |
| aspartate-semialdehyde dehydrogenase | A9819_19510 | Not Available | Negative | 3746771 - 3747874 | 40020.2 |
| antibiotic transporter | A9819_19515 | Not Available | Positive | 3748066 - 3748659 | 21491.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





