Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | A9819_19260 | Not Available | Negative | 3687495 - 3688583 | 38883.4 |
| shikimate kinase | A9819_19265 | Not Available | Negative | 3688640 - 3689161 | 19539.2 |
| dna transporter hofq | A9819_19270 | Not Available | Negative | 3689562 - 3690800 | 44739.9 |
| dna utilization protein hofp | A9819_19275 | Not Available | Negative | 3690712 - 3691116 | 15099.1 |
| dna utilization protein hofo | A9819_19280 | Not Available | Negative | 3691106 - 3691546 | 16869.2 |
| dna utilization protein hofn | A9819_19285 | Not Available | Negative | 3691530 - 3692069 | 20851.3 |
| dna utilization protein hofm | A9819_19290 | Not Available | Negative | 3692069 - 3692848 | 29136.2 |
| carboxypeptidase/penicillin-binding protein 1a | A9819_19295 | Not Available | Positive | 3692968 - 3695520 | 93584.4 |
| adp compounds hydrolase nude | A9819_19300 | Not Available | Negative | 3695685 - 3696245 | 21154.4 |
| intracellular growth attenuator protein igaa | A9819_19305 | Not Available | Positive | 3696565 - 3698700 | 79491.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





