Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l29 | A9819_18955 | Not Available | Negative | 3642234 - 3642425 | 7273.91 |
| 50s ribosomal protein l16 | A9819_18960 | Not Available | Negative | 3642425 - 3642835 | 15282.1 |
| 30s ribosomal protein s3 | A9819_18965 | Not Available | Negative | 3642848 - 3643549 | 25984.8 |
| 50s ribosomal protein l22 | A9819_18970 | Not Available | Negative | 3643567 - 3643899 | 12227.0 |
| 30s ribosomal protein s19 | A9819_18975 | Not Available | Negative | 3643914 - 3644192 | 10430.9 |
| 50s ribosomal protein l2 | A9819_18980 | Not Available | Negative | 3644209 - 3645030 | 29862.3 |
| 50s ribosomal protein l23 | A9819_18985 | Not Available | Negative | 3645048 - 3645350 | 11199.8 |
| 50s ribosomal protein l4 | A9819_18990 | Not Available | Negative | 3645347 - 3645952 | 22087.8 |
| 50s ribosomal protein l3 | A9819_18995 | Not Available | Negative | 3645963 - 3646592 | 22244.8 |
| 30s ribosomal protein s10 | A9819_19000 | Not Available | Negative | 3646625 - 3646936 | 11736.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





