Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-glyceraldehyde 3-phosphate reductase | A9819_17310 | Not Available | Positive | 3345490 - 3346530 | 38823.3 |
| tigr00645 family protein | A9819_17315 | Not Available | Negative | 3346570 - 3347064 | 18642.3 |
| nad(p)-dependent oxidoreductase | A9819_17320 | Not Available | Positive | 3347255 - 3348139 | 31489.8 |
| tonb system transport protein exbd | A9819_17325 | Not Available | Negative | 3348411 - 3348836 | 15513.8 |
| biopolymer transporter exbb | A9819_17330 | Not Available | Negative | 3348843 - 3349577 | 26289.0 |
| hypothetical protein | A9819_17335 | Not Available | Negative | 3349570 - 3349725 | 5961.34 |
| cystathionine beta-lyase | A9819_17340 | Not Available | Positive | 3349829 - 3351016 | 43219.8 |
| deda family protein | A9819_17345 | Not Available | Positive | 3351156 - 3351815 | 24135.3 |
| arac family transcriptional regulator | A9819_17350 | Not Available | Negative | 3351855 - 3352811 | 36015.9 |
| alcohol dehydrogenase | A9819_17355 | Not Available | Positive | 3352948 - 3354111 | 42099.4 |
Pathways
1388 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





