Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase maturation nickel metallochaperone hypa | A9819_17260 | Not Available | Negative | 3337567 - 3337908 | 12689.1 |
| hydrogenase 2-specific chaperone | A9819_17265 | Not Available | Negative | 3337901 - 3338389 | 17994.7 |
| hyad/hybd family hydrogenase maturation endopeptidase | A9819_17270 | Not Available | Negative | 3338382 - 3338876 | 17725.8 |
| hydrogenase 2 large subunit | A9819_17275 | Not Available | Negative | 3338876 - 3340579 | 62535.6 |
| ni/fe-hydrogenase cytochrome b subunit | A9819_17280 | Not Available | Negative | 3340576 - 3341754 | 43576.6 |
| hydrogenase 2 protein hyba | A9819_17285 | Not Available | Negative | 3341744 - 3342730 | 35990.9 |
| hydrogenase-2 small chain | A9819_17290 | Not Available | Negative | 3342733 - 3343851 | 39654.3 |
| hypothetical protein | A9819_17295 | Not Available | Negative | 3343858 - 3344043 | 6965.43 |
| hypothetical protein | A9819_17300 | Not Available | Negative | 3344040 - 3344327 | 10946.1 |
| dienelactone hydrolase family protein | A9819_17305 | Not Available | Negative | 3344446 - 3345372 | 34143.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





