Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KCJK3945 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1350016 bp
Thymine Count
1350628 bp
Guanine Count
1359613 bp
Cytosine Count
1366917 bp
Genome Length
5427174 bp
Protein-coding Genes
5060 genes
Non-Coding Genes
372 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspf | A9819_17100 | Not Available | Negative | 3297669 - 3298892 | 44967.8 |
| type ii secretion system protein gspd | A9819_17110 | Not Available | Negative | 3300385 - 3302445 | 74192.1 |
| type ii secretion system protein gspc | A9819_17115 | Not Available | Negative | 3302475 - 3303434 | 35673.2 |
| hypothetical protein | A9819_17120 | Not Available | Negative | 3303452 - 3303862 | 14700.8 |
| prepilin peptidase | A9819_17125 | Not Available | Negative | 3303928 - 3304737 | 29502.9 |
| accessory colonization factor acfd | A9819_17130 | Not Available | Negative | 3304877 - 3309430 | 167348.0 |
| glycolate permease glca | A9819_17140 | Not Available | Negative | 3309916 - 3311598 | 58923.7 |
| malate synthase g | A9819_17145 | Not Available | Negative | 3311953 - 3314124 | 80462.2 |
| protein glcg | A9819_17150 | Not Available | Negative | 3314146 - 3314550 | 13737.5 |
| glycolate oxidase iron-sulfur subunit | A9819_17155 | Not Available | Negative | 3314555 - 3315778 | 45082.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





